| Period | Manager | Country | born |
| 21/08/2024 - 30/06/2025 | Matija Mirkov |
|
28/02/1979 |
| 01/07/2024 - 19/08/2024 | Ernest Gjoka |
|
25/01/1970 |
| 22/03/2023 - 30/06/2024 | Cihat Arslan |
|
09/02/1970 |
| 16/04/2021 - 30/06/2023 | Goce Sedloski |
|
10/04/1974 |
| 06/04/2021 - 15/04/2021 | Enes Qaili |
|
01/03/1988 |
| 05/01/2021 - 05/04/2021 | Hasan Özer |
|
01/10/1974 |
| 01/10/2020 - 18/12/2020 | Ümit Karan |
|
01/10/1976 |
| 02/03/2020 - 30/09/2020 | Muharem Bajrami |
|
29/11/1985 |
| 23/09/2019 - 01/03/2020 | Qatip Osmani |
|
29/06/1969 |
| 27/08/2019 - 22/09/2019 | Recai Şahinler |
|
19/07/1948 |
| 04/10/2018 - 26/08/2019 | Ümit Karan |
|
01/10/1976 |
| 01/09/2018 - 01/10/2018 | Hayati Soydaş |
|
01/05/1966 |
| 13/03/2018 - 24/08/2018 | Zekirija Ramadani |
|
21/01/1978 |
| 29/11/2016 - 12/03/2018 | Ardijan Nuhiji |
|
07/12/1978 |
| 05/01/2016 - 28/11/2016 | Visar Ganiu |
|
|
| 01/07/2014 - 04/01/2016 | Zekirija Ramadani |
|
21/01/1978 |
| 01/07/2004 - 30/06/2005 | Blagoje Kitanovski |
|
14/07/1962 |
| 01/07/2004 - 30/06/2005 | Adnan Zekir |
|
01/08/1952 |
| 01/07/2001 - 30/06/2002 | Ekrem Maglajlija |
|
|
| 01/07/1999 - 30/06/2001 | Đorđe Jovanovski |
|
29/03/1956 |
| 01/01/1998 - 31/12/1998 | Zlatko Krmpotić |
|
07/08/1958 |
| 01/07/1997 - 30/06/1998 | Nihat Nalbantic |
|
|
| 01/07/1996 - 30/06/1997 | Vančo Balevski |
|
03/07/1947 |
![KF Shkupi [Youth]](https://s.hs-data.com/bilder/wappen/mini/26195.gif?fallback=png "KF Shkupi [Youth]"){kind=small}
![KF Shkupi [Youth B]](https://s.hs-data.com/bilder/wappen/mini/26196.gif?fallback=png "KF Shkupi [Youth B]"){kind=small}
![KF Shkupi [Youth C]](https://s.hs-data.com/bilder/wappen/mini/29736.gif?fallback=png "KF Shkupi [Youth C]"){kind=small}
