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| 1st(1st leg) | Deportivo Suchitepéquez | - | CSD Municipal | 2:0 | ||
| 2nd (2nd leg) | CSD Municipal | - | Deportivo Suchitepéquez | 3:0 aet | ||
| 1st(1st leg): 04/06/2009 19:30 | 2nd (2nd leg): 07/06/2009 18:00 | Winner: CSD Municipal | ||||
| 1st(1st leg) | Deportivo Jalapa | - | Deportivo Heredia | 1:0 | ||
| 2nd (2nd leg) | Deportivo Heredia | - | Deportivo Jalapa | 2:2 | ||
| 1st(1st leg): 05/06/2009 03:00 | 2nd (2nd leg): 07/06/2009 20:00 | Winner: Deportivo Jalapa | ||||
