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| 1st(1st leg) | AO Trikala | - | Asteras Tripolis | 0:2 (0:1) | ||
| 2nd (2nd leg) | Asteras Tripolis | - | AO Trikala | 1:0 (1:0) | ||
| 1st(1st leg): 10/01/2017 15:15 | 2nd (2nd leg): 25/01/2017 15:15 | Winner: Asteras Tripolis | ||||
| 1st(1st leg) | Panetolikos | - | PAOK Saloniki | 0:2 (0:0) | ||
| 2nd (2nd leg) | PAOK Saloniki | - | Panetolikos | 4:1 (2:0) | ||
| 1st(1st leg): 11/01/2017 15:15 | 2nd (2nd leg): 26/01/2017 17:30 | Winner: PAOK Saloniki | ||||
| 1st(1st leg) | Panathinaikos | - | Kissamikos | 3:0 (0:0) | ||
| 2nd (2nd leg) | Kissamikos | - | Panathinaikos | 0:4 (0:1) | ||
| 1st(1st leg): 12/01/2017 17:30 | 2nd (2nd leg): 01/02/2017 13:00 | Winner: Panathinaikos | ||||
| 1st(1st leg) | Xanthi FC | - | OFI Heraklion | 1:0 (1:0) | ||
| 2nd (2nd leg) | OFI Heraklion | - | Xanthi FC | 2:1 (1:0) | ||
| 1st(1st leg): 24/01/2017 15:15 | 2nd (2nd leg): 31/01/2017 14:00 | Winner: Xanthi FC | ||||
| 1st(1st leg) | Levadiakos | - | AEK Athen | 0:1 (0:0) | ||
| 2nd (2nd leg) | AEK Athen | - | Levadiakos | 6:0 (2:0) | ||
| 1st(1st leg): 25/01/2017 13:00 | 2nd (2nd leg): 01/02/2017 17:30 | Winner: AEK Athen | ||||
| 1st(1st leg) | Lamia | - | Atromitos | 2:2 (2:2) | ||
| 2nd (2nd leg) | Atromitos | - | Lamia | 2:0 (2:0) | ||
| 1st(1st leg): 25/01/2017 15:15 | 2nd (2nd leg): 01/02/2017 15:15 | Winner: Atromitos | ||||
| 1st(1st leg) | Aris Saloniki | - | Olympiakos Piraeus | 1:1 (1:0) | ||
| 2nd (2nd leg) | Olympiakos Piraeus | - | Aris Saloniki | 2:0 (0:0) | ||
| 1st(1st leg): 25/01/2017 17:30 | 2nd (2nd leg): 02/02/2017 17:30 | Winner: Olympiakos Piraeus | ||||
| 1st(1st leg) | Platanias Chanion | - | PAS Giannina | 1:0 (0:0) | ||
| 2nd (2nd leg) | PAS Giannina | - | Platanias Chanion | 1:2 (0:0, 1:0) aet | ||
| 1st(1st leg): 26/01/2017 15:15 | 2nd (2nd leg): 01/02/2017 15:15 | Winner: Platanias Chanion | ||||
