| 1. Round | 30/07/2016 | Sporting Charleroi | - | Waasland-Beveren | 1:0 | ||||
| 2. Round | 06/08/2016 | Waasland-Beveren | - | SV Zulte Waregem | 0:2 | ||||
| 3. Round | 13/08/2016 | KRC Genk | - | Waasland-Beveren | 2:2 | ||||
| 4. Round | 20/08/2016 | Waasland-Beveren | - | KV Mechelen | 2:2 | ||||
| 5. Round | 27/08/2016 | KV Oostende | - | Waasland-Beveren | 2:1 | ||||
| 6. Round | 09/09/2016 | Waasland-Beveren | - | Club Brugge KV | 1:0 | ||||
| 7. Round | 17/09/2016 | Sint-Truidense VV | - | Waasland-Beveren | 4:1 | ||||
| 8. Round | 24/09/2016 | Waasland-Beveren | - | Sporting Lokeren | 1:1 | ||||
| 9. Round | 01/10/2016 | KVC Westerlo | - | Waasland-Beveren | 1:0 |  |
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| 10. Round | 15/10/2016 | Waasland-Beveren | - | KAS Eupen | 4:2 | ||||
| 11. Round | 23/10/2016 | Standard Liège | - | Waasland-Beveren | 5:0 | |
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| 12. Round | 27/10/2016 | Waasland-Beveren | - | Royal Excel Mouscron | 0:0 | ||||
| 13. Round | 30/10/2016 | Waasland-Beveren | - | RSC Anderlecht | 2:1 |
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