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| 29/04/2025 | 16:00 | FK Nevėžis | - | Minija Kretinga | 1:3 (0:2) | |
| 16:00 | Utenis Utena | - | Tauras Tauragė | 1:5 (0:1) | ||
| 16:00 | Akmenes SC | - | FC Džiugas | 2:3 (0:1) | ||
| 17:00 | FK Riteriai | - | FA Šiauliai | 1:2 (1:1) | ||
| 18:00 | AFK Vilnius | - | FK Pempininkai | 4:2 (2:1) | ||
| 30/04/2025 | 16:00 | FK Kazlų Rūda | - | Be1 NFA | 1:0 (0:0) | |
| 17:00 | Neptūnas Klaipėda | - | Kauno Žalgiris | 0:1 (0:0, 0:0) aet | ||
| 06/05/2025 | 16:30 | FK Atmosfera | - | Banga Gargždai | 0:2 (0:2) | |
| 17:00 | DFK Dainava | - | FK Žalgiris | 0:6 (0:2) | ||
| 17:00 | Sveikata Kybartai | - | Babrungas Plungė | 0:1 (0:0) | ||
| 17:30 | Klaipėdos FM | - | FK Jonava | 2:3 (1:0, 2:2) aet | ||
| 18:00 | Sirijus Klaipeda | - | FK TransINVEST | 0:5 (0:2) | ||
| 18:30 | Širvintos-VGTU Vilkai | - | FC Hegelmann | 0:6 (0:2) | ||
| 07/05/2025 | 17:30 | FK Garliava | - | FK Ekranas | 1:0 (1:0) | |
| 17:30 | FK Trivartis | - | FK Panevėžys | 0:13 (0:6) | ||
| 18:00 | Vilnius FA | - | FK Sūduva | 0:4 (0:1) |
